* genhis 1.78: generalized histogram data from * ev 3.70 evolution of sites * * 64 number of creatures * 256 number of potential binding sites, G * 16 number of sites per creature, gamma * 6 width of the recognizer in bases * 5 bases per integer of the recognizer * 1 mutation rate in hits per creature per generation * 0.300000000000 initial seed for the random number generator (given in evp) * 2000 cycles * 1 display interval * false : listing average mistakes * false : listing changes of mistakes * false : listing individuals * false : listing status to output * false : listing Rindividual orbits * true : listing Rsequence * false : listing genomic uncertainty * false : listing mistakes of best individual * 0.300000000000 current seed for the random number generator * false : selecting by mistakes * 1000 storage frequency * 0.00000 sigma, standard deviation of noise * No noise is modeled * b SPECIAL RULE for ties: r: random, b: both, s: sort * * creation * available places to put sites: 126 * zero of the first site is at position 131 * sites placed randomly * * * date-time stamp: 2002/03/03 15:57:56* * * the columns are dependent on the flag: * a = give average number of mistakes of population * c = flags change in number of mistakes of primary organism * g = genomic uncertainty (bits) in primary organism * i = give individuals mistakes * r = information in primary organism * m = mistakes range, from lowest to highest * For each line, the data are as follows: * generation# "a" average "+/-" standard-deviation * generation# "c" c/gamma c=change-in-mistakes Rs (if r is on, 0 otherwise) * generation# "i" mistakes "individual#" rank * generation# "g" genomic-uncertainty gna gnc gng gnt * generation# "r" information "+/-" standard-deviation * generation# "mistakes:" lowest highest * * * * parameters: * 3 is the data column used * 2001 numbers are in the file * -0.60978 is the minimum number * 1.35002 is the maximum number * 0.11092 is the MEAN * 0.29928 is the STANDARD DEVIATION * 0.00669 is the STANDARD ERROR OF THE MEAN (SEM) * 0.08957 is the variance * 2.60663 is the uncertainty in bits * 0.30669 is the computed uncertainty in bits (Shannon p.57) * * -1.00000 to 6.00000 is the range of data plotted * 0.20000 is the x-axis interval * 36 is the number of intervals * 477 is the maximum y-axis value * 0.11111 is the y-axis scale * * gaussian standard plotted * * interval histogram * beginning value * -1.00000 0 -0.80000 1 : -0.60000 25 +++ : -0.40000 300 ++++++++++++++++++++++*++++++++++ -0.20000 477 +++++++++++++++++++++++++++++++++++++++++++++*+++++++ 0.00000 468 ++++++++++++++++++++++++++++++++++++++++++++++++++++ : 0.20000 363 ++++++++++++++++++++++++++++++++++++++++ : 0.40000 222 ++++++++++++++++++++++++* 0.60000 119 ++++++++*++++ 0.80000 24 +*+ 1.00000 1 1.20000 1 1.40000 0 1.60000 0 1.80000 0 2.00000 0 2.20000 0 2.40000 0 2.60000 0 2.80000 0 3.00000 0 3.20000 0 3.40000 0 3.60000 0 3.80000 0 4.00000 0 4.20000 0 4.40000 0 4.60000 0 4.80000 0 5.00000 0 5.20000 0 5.40000 0 5.60000 0 5.80000 0 6.00000 0